NFDI4BIOIMAGE contributes to core infrastructure indispensible for bioimage data handling, processing and analysis. This includes libraries such as Bio-Formats or the bioimage management platform OMERO and its functionalities.
Research software engineers of the consortium develop and maintain software tools and projects linked to research data management in bioimaging some of which are available as GitHub repositories. We develop tools such as OMERO-vitessce for intermodal linkage of sequencing and bio-image data and metadata, metadata linkage tools such as LEO or OMERO plugins.
Feel free to explore them and get in touch with us for feedback and questions by creating an issue in the repo or on image.sc or reach out to our Help Desk service for support. You find training materials, plugins and scripts, bioimage data collection projects, our NFDI4BIOIMAGE postcards and much more. Explore, reuse and contribute to it!